Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787696.1_cds_XP_016509800.1_225
CDS Infomation

[gene=LOC107827193] [db_xref=GeneID:107827193] [protein=DNA-directed RNA polymerase III subunit RPC5-like] [protein_id=XP_016509800.1] [location=join(20174..20548,20640..20708,20836..20943,25996..26070,41806..41967,42414..42449,42717..42823,42977..43048,43507..43555,43690..44282,45134..45340,45421..45541,47540..47611)] [gbkey=CDS]
Sequence

ATGGCGGAGATGGACTTGGACTTCGACGGCCCAAGTAAAGCTTCAACTAGGCCATCCCGT
TTTGCTCCCAAAAGCTCTAAATTGAAGCCCCAACCCCAACCAGTAACCAAACCCAAACCT
GAAACACCGTTATCATCTTCTGATCCTCCTATTCCGACTAAAAAGGAAGAATTATTTTCA
AAACCCTCAGTAAAAGATCATCCAGCCGAAAACGGAGCCGCAGTGGGTAAAGATGACGTT
CCATTGGATGAAAACACTACGGGAGACGACGTGTCAGAAGAAGAACAAGTCGCCATGGAT
ACTGATAGCGTTGACGATGAAGTTGTTCGTGAAATTGATGTGTTTTTTACCCCTTCCTCG
GATCCTAACTCTCAGCTGTATGTGTTCCAATATCCGTTGAGGCCCGTATGGCGTCCCTAT
GAGTTGGAGGAAAGATGTCAAGAGGTGAGATTGAGACCTTCAACTGCACAAATGGAGGTT
GATTTGGCAGTAGATTTAGATTCTAAAAACTTTGACCGAGACTCTGTTCATGCAGTAAAG
ATGGAAAAGCAGACTCTTTCTACATCATGGATGCCATTATCAACTTGCACCTCTGGATAT
GCTGTTGGGGTCCTCATTGGTGATAAGTTACACCTCAATCCTATTCATGCAGTTGTACAG
CTCCGACCATCACAGCAGCATCTTAAGGAAAGTGAGTTGAAGAAGAACATTGCCACCAGC
AGTGATGGAAAAACTGTTGAAAACAAAGAAGTCGAGGAAAAAAAGCCTGCGGGTCCATCA
AAGAAGCAGAACAAACCACCTGGGAATGACAAGGATATTGAAGAGCATTGGGTACATCTA
AAATACCATGGAGCTAGGAGTGACATTTCAGCCAGATATCTACAGGAAATAGCCATGGCG
GAAGGCTCTCCAGTATCATTTTCAATGAGCCCGGTTGATTATCTGAACGCTGTGTGTCCT
GGCAGACCAACTGACACTGACAGATTAAAAATTCTTCGAACAAGGTTGTCTCAATTACCT
CTTGAAGAACGCATTAGAACTTGGCTTCTTGAGGGGCCTCCAATTCATCGTTTTGATGCT
CTAAAGCACCTGGCGCTGGATGATCCTGTTGATGAAATTTTGAGAGTTCTCCAAAGATAC
GCACAATTAGTTCAAGGATTATGGGTTCCAAAAAGTTCATTAATCTATGGAAAGAATGAT
GGACTTGAAGTTTTAGCAAGGAATTTTATTCTCTTTGAGTTTAGCAAGAGTACCATTATT
AAGCAGAAAGTTTTTGCCAGGAGGTTGGATTTCCTTAAAGCTGCGAAACCAACACTAAAA
TCATTAGCTGTTGAGAGGCCTGACCTGAATGATTGGAAGCTCAAAGAGCATCCTGACAAG
AAATTTGAAGTTCTTTATGGTGATGTTGTGAAAGAGCAGCAAGCTACCTGGGAATGCATG
GGGAAACAGATCAATGGTATTTTGTCCGGAGGAAGAAACAGGCCTGCTATGAAGAATCCT
TTAAATCCAAATGCCAACATTCCTGCACTGCCAGGTGGTGGTAAACCTGCCCCTGGGTCA
CTTTTGCGAACATCTATGTCAGAAAAAACTCGAGAAGCTTTACCAAAGGCGCTTCAAAAA
GTTTTTAGAATCTATAAGGCTTGCAGTTTCCAGCAAATCCGCCAACGTCTGCGAGATGTG
GCAGTTTCTGAGTCTCAAAAGGGAGATGCAAAGAAGGCTATAACTGCAGCCAATTCTGTG
AATGATGCACCTCCCGAGGAGATACAGGCAGTGATTAATCAGGTTGCTGTAAACATCCAT
GGTGTCTATGTTTTGAAGTCATCACCAGATAATCCACAATATGACGCATTGAGGAAAGTT
GTAATTGACCTTCTTATGGCTGAAGGGCCGAGTGCAAAGCTAAAGAAAGCCTCTATAGTT
GAAGCTGCCAAGTTGCAATTGAATAGGGATATTACCGATATTGAGTTTAAAAAGGTTATG
CAGGAATTATGTGAATCAAAAAATTCAGCATGGGTTTTGAGAAGTGGTGATGGCAGTTCA
TCATAG

Peptide Sequence

PEP ID

XP_016509800.1
PEP Infomation

PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Nicotiana tabacum]
Sequence

MAEMDLDFDGPSKASTRPSRFAPKSSKLKPQPQPVTKPKPETPLSSSDPPIPTKKEELFS
KPSVKDHPAENGAAVGKDDVPLDENTTGDDVSEEEQVAMDTDSVDDEVVREIDVFFTPSS
DPNSQLYVFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAVDLDSKNFDRDSVHAVK
MEKQTLSTSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELKKNIATS
SDGKTVENKEVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEIAMA
EGSPVSFSMSPVDYLNAVCPGRPTDTDRLKILRTRLSQLPLEERIRTWLLEGPPIHRFDA
LKHLALDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTII
KQKVFARRLDFLKAAKPTLKSLAVERPDLNDWKLKEHPDKKFEVLYGDVVKEQQATWECM
GKQINGILSGGRNRPAMKNPLNPNANIPALPGGGKPAPGSLLRTSMSEKTREALPKALQK
VFRIYKACSFQQIRQRLRDVAVSESQKGDAKKAITAANSVNDAPPEEIQAVINQVAVNIH
GVYVLKSSPDNPQYDALRKVVIDLLMAEGPSAKLKKASIVEAAKLQLNRDITDIEFKKVM
QELCESKNSAWVLRSGDGSSS

Transcript Sequence

Gene sequence data has not been registered.